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Rice Functional Genomics: Challenges, Progress and Prospects

Narayana M. Upadhyaya

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Institución detectada Año de publicación Navegá Descargá Solicitá
No detectada 2007 SpringerLink

Información

Tipo de recurso:

libros

ISBN impreso

978-0-387-48903-2

ISBN electrónico

978-0-387-48914-8

Editor responsable

Springer Nature

País de edición

Reino Unido

Fecha de publicación

Información sobre derechos de publicación

© Springer Science+Business Media, LLC 2007

Tabla de contenidos

Introduction

Narayana M. Upadhyaya; Elizabeth S. Dennis

The reliable assessment of hazards or risks arising from groundwater contamination problems and the design of efficient and effective techniques to mitigate these problems require the capability to predict the behavior of chemical contaminants in flowing water. To choose an appropriate remediation strategy, knowledge of the contaminant release source and time release history becomes pertinent. With more and more contamination sites being detected nowadays, it is almost impossible to perform exhaustive drilling, testing, and chemical fingerprint analysis every time, especially in the case of pollution being generated by highway construction and repair materials. Moreover, most of the time, chemical finger printing, state and federal agency records, and private parties' history records of handling hazardous substances are not sufficient to allow a unique solution for the timing of source releases. The purpose of this chapter is to present and review mathematical methods that have been developed during the past 15 years to perform hydrologic inversion and specifically to identify the contaminant source location and time-release history.

Pp. 1-4

Rice Genome Sequence: The Foundation for Understanding the Genetic Systems

Takashi Matsumoto; Rod A. Wing; Bin Han; Takuji Sasaki

The reliable assessment of hazards or risks arising from groundwater contamination problems and the design of efficient and effective techniques to mitigate these problems require the capability to predict the behavior of chemical contaminants in flowing water. To choose an appropriate remediation strategy, knowledge of the contaminant release source and time release history becomes pertinent. With more and more contamination sites being detected nowadays, it is almost impossible to perform exhaustive drilling, testing, and chemical fingerprint analysis every time, especially in the case of pollution being generated by highway construction and repair materials. Moreover, most of the time, chemical finger printing, state and federal agency records, and private parties' history records of handling hazardous substances are not sufficient to allow a unique solution for the timing of source releases. The purpose of this chapter is to present and review mathematical methods that have been developed during the past 15 years to perform hydrologic inversion and specifically to identify the contaminant source location and time-release history.

Pp. 5-20

Rice Genome Annotation: Beginnings of Functional Genomics

Takeshi Itoh

The reliable assessment of hazards or risks arising from groundwater contamination problems and the design of efficient and effective techniques to mitigate these problems require the capability to predict the behavior of chemical contaminants in flowing water. To choose an appropriate remediation strategy, knowledge of the contaminant release source and time release history becomes pertinent. With more and more contamination sites being detected nowadays, it is almost impossible to perform exhaustive drilling, testing, and chemical fingerprint analysis every time, especially in the case of pollution being generated by highway construction and repair materials. Moreover, most of the time, chemical finger printing, state and federal agency records, and private parties' history records of handling hazardous substances are not sufficient to allow a unique solution for the timing of source releases. The purpose of this chapter is to present and review mathematical methods that have been developed during the past 15 years to perform hydrologic inversion and specifically to identify the contaminant source location and time-release history.

Pp. 21-30

Genome-Wide RNA Expression Profiling in Rice

Shoshi Kikuchi; Guo-Liang Wang; Lei Li

The reliable assessment of hazards or risks arising from groundwater contamination problems and the design of efficient and effective techniques to mitigate these problems require the capability to predict the behavior of chemical contaminants in flowing water. To choose an appropriate remediation strategy, knowledge of the contaminant release source and time release history becomes pertinent. With more and more contamination sites being detected nowadays, it is almost impossible to perform exhaustive drilling, testing, and chemical fingerprint analysis every time, especially in the case of pollution being generated by highway construction and repair materials. Moreover, most of the time, chemical finger printing, state and federal agency records, and private parties' history records of handling hazardous substances are not sufficient to allow a unique solution for the timing of source releases. The purpose of this chapter is to present and review mathematical methods that have been developed during the past 15 years to perform hydrologic inversion and specifically to identify the contaminant source location and time-release history.

Pp. 31-59

Rice Proteomics: A Step Toward Functional Analysis of the Rice Genome

Setsuko Komatsu

The reliable assessment of hazards or risks arising from groundwater contamination problems and the design of efficient and effective techniques to mitigate these problems require the capability to predict the behavior of chemical contaminants in flowing water. To choose an appropriate remediation strategy, knowledge of the contaminant release source and time release history becomes pertinent. With more and more contamination sites being detected nowadays, it is almost impossible to perform exhaustive drilling, testing, and chemical fingerprint analysis every time, especially in the case of pollution being generated by highway construction and repair materials. Moreover, most of the time, chemical finger printing, state and federal agency records, and private parties' history records of handling hazardous substances are not sufficient to allow a unique solution for the timing of source releases. The purpose of this chapter is to present and review mathematical methods that have been developed during the past 15 years to perform hydrologic inversion and specifically to identify the contaminant source location and time-release history.

Pp. 61-89

Metabolomics: Enabling Systems-Level Phenotyping in Rice Functional Genomics

Lee Tarpley; Ute Roessner

The reliable assessment of hazards or risks arising from groundwater contamination problems and the design of efficient and effective techniques to mitigate these problems require the capability to predict the behavior of chemical contaminants in flowing water. To choose an appropriate remediation strategy, knowledge of the contaminant release source and time release history becomes pertinent. With more and more contamination sites being detected nowadays, it is almost impossible to perform exhaustive drilling, testing, and chemical fingerprint analysis every time, especially in the case of pollution being generated by highway construction and repair materials. Moreover, most of the time, chemical finger printing, state and federal agency records, and private parties' history records of handling hazardous substances are not sufficient to allow a unique solution for the timing of source releases. The purpose of this chapter is to present and review mathematical methods that have been developed during the past 15 years to perform hydrologic inversion and specifically to identify the contaminant source location and time-release history.

Pp. 91-107

Use of Naturally Occurring Alleles for Crop Improvement

Anjali S. Iyer-Pascuzzi; Megan T. Sweeney; Neelamraju Sarla; Susan R. McCouch

The reliable assessment of hazards or risks arising from groundwater contamination problems and the design of efficient and effective techniques to mitigate these problems require the capability to predict the behavior of chemical contaminants in flowing water. To choose an appropriate remediation strategy, knowledge of the contaminant release source and time release history becomes pertinent. With more and more contamination sites being detected nowadays, it is almost impossible to perform exhaustive drilling, testing, and chemical fingerprint analysis every time, especially in the case of pollution being generated by highway construction and repair materials. Moreover, most of the time, chemical finger printing, state and federal agency records, and private parties' history records of handling hazardous substances are not sufficient to allow a unique solution for the timing of source releases. The purpose of this chapter is to present and review mathematical methods that have been developed during the past 15 years to perform hydrologic inversion and specifically to identify the contaminant source location and time-release history.

Pp. 107-147

Chemical- and Irradiation-Induced Mutants and TILLING

Ramesh S. Bhat; Narayana M. Upadhyaya; Abed Chaudhury; Chitra Raghavan; Fulin Qiu; Hehe Wang; Jianli Wu; Kenneth McNally; Hei Leung; Brad Till; Steven Henikoff; Luca Comai

The reliable assessment of hazards or risks arising from groundwater contamination problems and the design of efficient and effective techniques to mitigate these problems require the capability to predict the behavior of chemical contaminants in flowing water. To choose an appropriate remediation strategy, knowledge of the contaminant release source and time release history becomes pertinent. With more and more contamination sites being detected nowadays, it is almost impossible to perform exhaustive drilling, testing, and chemical fingerprint analysis every time, especially in the case of pollution being generated by highway construction and repair materials. Moreover, most of the time, chemical finger printing, state and federal agency records, and private parties' history records of handling hazardous substances are not sufficient to allow a unique solution for the timing of source releases. The purpose of this chapter is to present and review mathematical methods that have been developed during the past 15 years to perform hydrologic inversion and specifically to identify the contaminant source location and time-release history.

Pp. 148-180

T-DNA Insertion Mutants as a Resource for Rice Functional Genomics

Emmanuel Guiderdoni; Gynheung An; Su-May Yu; Yue-ie Hsing; Changyin Wu

The reliable assessment of hazards or risks arising from groundwater contamination problems and the design of efficient and effective techniques to mitigate these problems require the capability to predict the behavior of chemical contaminants in flowing water. To choose an appropriate remediation strategy, knowledge of the contaminant release source and time release history becomes pertinent. With more and more contamination sites being detected nowadays, it is almost impossible to perform exhaustive drilling, testing, and chemical fingerprint analysis every time, especially in the case of pollution being generated by highway construction and repair materials. Moreover, most of the time, chemical finger printing, state and federal agency records, and private parties' history records of handling hazardous substances are not sufficient to allow a unique solution for the timing of source releases. The purpose of this chapter is to present and review mathematical methods that have been developed during the past 15 years to perform hydrologic inversion and specifically to identify the contaminant source location and time-release history.

Pp. 181-221

Transposon Insertional Mutants: A Resource for Rice Functional Genomics

Qian-Hao Zhu; Moo Young Eun; Chang-deok Han; Chellian Santhosh Kumar; Andy Pereira; Srinivasan Ramachandran; Venkatesan Sundaresan; Andrew L. Eamens; Narayana M. Upadhyaya; Ray Wu

The reliable assessment of hazards or risks arising from groundwater contamination problems and the design of efficient and effective techniques to mitigate these problems require the capability to predict the behavior of chemical contaminants in flowing water. To choose an appropriate remediation strategy, knowledge of the contaminant release source and time release history becomes pertinent. With more and more contamination sites being detected nowadays, it is almost impossible to perform exhaustive drilling, testing, and chemical fingerprint analysis every time, especially in the case of pollution being generated by highway construction and repair materials. Moreover, most of the time, chemical finger printing, state and federal agency records, and private parties' history records of handling hazardous substances are not sufficient to allow a unique solution for the timing of source releases. The purpose of this chapter is to present and review mathematical methods that have been developed during the past 15 years to perform hydrologic inversion and specifically to identify the contaminant source location and time-release history.

Pp. 223-271