Catálogo de publicaciones - libros
Emergent Computation: Emphasizing Bioinformatics
Matthew Simon
Resumen/Descripción – provisto por la editorial
No disponible.
Palabras clave – provistas por la editorial
Biophysics and Biological Physics; Biomedical Engineering; Biochemical Engineering
Disponibilidad
Institución detectada | Año de publicación | Navegá | Descargá | Solicitá |
---|---|---|---|---|
No detectada | 2005 | SpringerLink |
Información
Tipo de recurso:
libros
ISBN impreso
978-0-387-22046-8
ISBN electrónico
978-0-387-27270-2
Editor responsable
Springer Nature
País de edición
Reino Unido
Fecha de publicación
2005
Información sobre derechos de publicación
© Springer Science+Business Media, Inc. 2005
Cobertura temática
Tabla de contenidos
A Review of Chemistry
Matthew Simon
Gene set enrichment analysis is a microarray data analysis method that uses predefined gene sets and ranks of genes to identify significant biological changes in microarray data sets. In this paper we present a novel method integrating gene interaction information with Gene Ontology (GO) for the construction of new interesting enriched gene sets. The experimental results show that the introduced method improves over traditional methods that compute the enrichment of a single GO terms, i.e. that it is capable to find new statistically relevant descriptions of the biology governing the experiments not detectable by the existing methods.
Part I - Emergent Computation: Bioinformatics | Pp. 3-73
A Review of Aspects of Automata Theory
Matthew Simon
Gene set enrichment analysis is a microarray data analysis method that uses predefined gene sets and ranks of genes to identify significant biological changes in microarray data sets. In this paper we present a novel method integrating gene interaction information with Gene Ontology (GO) for the construction of new interesting enriched gene sets. The experimental results show that the introduced method improves over traditional methods that compute the enrichment of a single GO terms, i.e. that it is capable to find new statistically relevant descriptions of the biology governing the experiments not detectable by the existing methods.
Part I - Emergent Computation: Bioinformatics | Pp. 75-86
The Beginning Numbers
Matthew Simon
Gene set enrichment analysis is a microarray data analysis method that uses predefined gene sets and ranks of genes to identify significant biological changes in microarray data sets. In this paper we present a novel method integrating gene interaction information with Gene Ontology (GO) for the construction of new interesting enriched gene sets. The experimental results show that the introduced method improves over traditional methods that compute the enrichment of a single GO terms, i.e. that it is capable to find new statistically relevant descriptions of the biology governing the experiments not detectable by the existing methods.
Part I - Emergent Computation: Bioinformatics | Pp. 87-114
Regular Languages: DNA and RNA
Matthew Simon
Gene set enrichment analysis is a microarray data analysis method that uses predefined gene sets and ranks of genes to identify significant biological changes in microarray data sets. In this paper we present a novel method integrating gene interaction information with Gene Ontology (GO) for the construction of new interesting enriched gene sets. The experimental results show that the introduced method improves over traditional methods that compute the enrichment of a single GO terms, i.e. that it is capable to find new statistically relevant descriptions of the biology governing the experiments not detectable by the existing methods.
Part I - Emergent Computation: Bioinformatics | Pp. 115-144
Context-Free Languages: DNA and RNA
Matthew Simon
Gene set enrichment analysis is a microarray data analysis method that uses predefined gene sets and ranks of genes to identify significant biological changes in microarray data sets. In this paper we present a novel method integrating gene interaction information with Gene Ontology (GO) for the construction of new interesting enriched gene sets. The experimental results show that the introduced method improves over traditional methods that compute the enrichment of a single GO terms, i.e. that it is capable to find new statistically relevant descriptions of the biology governing the experiments not detectable by the existing methods.
Part I - Emergent Computation: Bioinformatics | Pp. 145-196
Context-Sensitive Languages: DNA, RNA, Proteins
Matthew Simon
Gene set enrichment analysis is a microarray data analysis method that uses predefined gene sets and ranks of genes to identify significant biological changes in microarray data sets. In this paper we present a novel method integrating gene interaction information with Gene Ontology (GO) for the construction of new interesting enriched gene sets. The experimental results show that the introduced method improves over traditional methods that compute the enrichment of a single GO terms, i.e. that it is capable to find new statistically relevant descriptions of the biology governing the experiments not detectable by the existing methods.
Part I - Emergent Computation: Bioinformatics | Pp. 197-233
Turing Machines and Sub-Turing Machines
Matthew Simon
Gene set enrichment analysis is a microarray data analysis method that uses predefined gene sets and ranks of genes to identify significant biological changes in microarray data sets. In this paper we present a novel method integrating gene interaction information with Gene Ontology (GO) for the construction of new interesting enriched gene sets. The experimental results show that the introduced method improves over traditional methods that compute the enrichment of a single GO terms, i.e. that it is capable to find new statistically relevant descriptions of the biology governing the experiments not detectable by the existing methods.
Part I - Emergent Computation: Bioinformatics | Pp. 235-258
Splicing Systems, H Systems
Matthew Simon
Gene set enrichment analysis is a microarray data analysis method that uses predefined gene sets and ranks of genes to identify significant biological changes in microarray data sets. In this paper we present a novel method integrating gene interaction information with Gene Ontology (GO) for the construction of new interesting enriched gene sets. The experimental results show that the introduced method improves over traditional methods that compute the enrichment of a single GO terms, i.e. that it is capable to find new statistically relevant descriptions of the biology governing the experiments not detectable by the existing methods.
Part I - Emergent Computation: Bioinformatics | Pp. 259-311
tRNA Structure
Matthew Simon
Gene set enrichment analysis is a microarray data analysis method that uses predefined gene sets and ranks of genes to identify significant biological changes in microarray data sets. In this paper we present a novel method integrating gene interaction information with Gene Ontology (GO) for the construction of new interesting enriched gene sets. The experimental results show that the introduced method improves over traditional methods that compute the enrichment of a single GO terms, i.e. that it is capable to find new statistically relevant descriptions of the biology governing the experiments not detectable by the existing methods.
Part I - Emergent Computation: Bioinformatics | Pp. 313-338
Semigroups and Bioinformatics
Matthew Simon
Gene set enrichment analysis is a microarray data analysis method that uses predefined gene sets and ranks of genes to identify significant biological changes in microarray data sets. In this paper we present a novel method integrating gene interaction information with Gene Ontology (GO) for the construction of new interesting enriched gene sets. The experimental results show that the introduced method improves over traditional methods that compute the enrichment of a single GO terms, i.e. that it is capable to find new statistically relevant descriptions of the biology governing the experiments not detectable by the existing methods.
Part I - Emergent Computation: Bioinformatics | Pp. 339-343