Catálogo de publicaciones - libros

This paper presents a method for extracting lymph node regions from 3-D abdominal CT images using 3-D minimum directional difference filter. In the case of surgery of colonic cancer, resection of metastasis lesions is performed with resection of a primary lesion. Lymph nodes are main route of metastasis and are quite important for deciding resection area. Diagnosis of enlarged lymph nodes is quite important process for surgical planning. However, manual detection of enlarged lymph nodes on CT images is quite burden task. Thus, development of lymph node detection process is very helpful for assisting such surgical planning task. Although there are several report that present lymph node detection, these methods detect lymph nodes primary from PET images or detect in 2-D image processing way. There is no method that detects lymph nodes directly from 3-D images. The purpose of this paper is to show an automated method for detecting lymph nodes from 3-D abdominal CT images. This method employs a 3-D minimum directional difference filter for enhancing blob structures with suppressing line structures. After that, false positive regions caused by residua and vein are eliminated using several kinds of information such as size, blood vessels, air in the colon. We applied the proposed method to three cases of 3-D abdominal CT images. The experimental results showed that the proposed method could detect 57.0 % of enlarged lymph nodes with 58 FPs per case.

Diffusion tensor imaging (DT-MRI) is very sensitive to corrupting noise due to the non linear relationship between the diffusion-weighted image intensities (DW-MRI) and the resulting diffusion tensor. Denoising is a crucial step to increase the quality of the estimated tensor field. This enhanced quality allows for a better quantification and a better image interpretation. The methods proposed in this paper are based on the Non-Local (NL) means algorithm. This approach uses the natural redundancy of information in images to remove the noise. We introduce three variations of the NL-means algorithms adapted to DW-MRI and to DT-MRI. Experiments were carried out on a set of 12 diffusion-weighted images (DW-MRI) of the same subject. The results show that the intensity based NL-means approaches give better results in the context of DT-MRI than other classical denoising methods, such as Gaussian Smoothing, Anisotropic Diffusion and Total Variation.

In this paper we propose to use inpainting to estimate the severity of atherosclerotic plaques from X-ray projections. Inpainting allows to “remove” the plaque and estimate what the background image for an uncalcified aorta would have looked like. A measure of plaque severity can then be derived by subtracting the inpainting from the original image. In contrast to the current standard of categorical calcification scoring from X-rays, our method estimates both the size and the density of calcified areas and provides a continuous severity score, thus allowing for measurement of more subtle differences.

We discuss a class of smooth inpainting methods, compare their ability to reconstruct the original images, and compare the inpainting based calcification score to the conventional categorical score in a longitudinal study on 49 patients addressing correlations of the calcification scores with hypertension, a known cardiovascular risk factor.

Fiber optics are widely used in flexible endoscopes which are indispensable for many applications in diagnosis and therapy. Computer-aided use of fiberscopes requires a digital sensor mounted at the proximal end. Most commercially available cameras for endoscopy provide the images by means of a regular grid of color filters what is known as the . Hence, the images suffer from false colored spatial moiré, which is further stressed by the downgrading fiber optic transmission yielding a honey comb pattern. To solve this problem we propose a new approach that extends the interpolation between known intensities of registered fibers to multi channel color applications. The inventive idea takes into account both the Gaussian intensity distribution of each fiber and the physical color distribution of the Bayer pattern. Individual color factors for interpolation of each fiber area make it possible to simultaneously remove both the comb structure from the fiber bundle as well as the Bayer pattern mosaicking from the sensor while preserving depicted structures and textures in the scene.

A method to estimate the magnitude MR data from several noisy samples is presented. It is based on the Linear Minimum Mean Squared Error (LMMSE) estimator for the Rician noise model when several scanning repetitions are available. This method gives a closed-form analytical solution that takes into account the probability distribution of the data as well as the existing level of noise, showing a better performance than methods such as the average or the median.

Simple summary statistics of Dynamic Contrast-Enhanced MRI (DCE-MRI) parameter maps (e.g. the median) neglect the spatial arrangement of parameters, which appears to carry important diagnostic and prognostic information. This paper describes novel statistics that are sensitive to both parameter values and their spatial arrangement. Binary objects are created from 3-D DCE-MRI parameter maps by “extruding” each voxel into a fourth dimension; the extrusion distance is proportional to the voxel’s value. The following statistics are then computed on these 4-D binary objects: surface area, volume, surface area to volume ratio, and box counting (fractal) dimension. An experiment using 4 low and 5 high grade gliomas showed significant differences between the two grades for box counting dimension computed for extruded maps, surface area of extruded and maps and the volume of extruded  maps (all  < 0.05). An experiment using 18 liver metastases imaged before and after treatment with a vascular endothelial growth factor (VEGF) inhibitor showed significant differences for surface area to volume ratio computed for extruded  and  maps ( = 0.0013 and  = 0.045 respectively).

Studies of myocardial motion using magnetic resonance imaging usually require multiple breath holds and several methods have been proposed in order to reduce the scan time. Rapid imaging using BLAST has gained much attention with its high reduction factors and image quality. Temporal smoothing, however, may reduce the accuracy when assessing cardiac function. In the present work, a modified reconstruction filter is proposed, that preserves more of the high temporal frequencies. Artificial decimation of a fully sampled data set was used to evaluate the reconstruction filter. Compared to the conventional BLAST reconstruction, the modified filter produced images with sharper temporal delineation of the myocardial walls. Quantitative analysis by means of regional velocity estimation showed that the modified reconstruction filter produced more accurate velocity estimations.

Accuracy of automatic cancer diagnosis is largely determined by two factors, namely, the precision of tumor segmentation, and the suitability of extracted features for discrimination between malignancy and benignancy. In this paper, we propose a new framework for accurate characterization of tumors in contrast enhanced MR images. First, a new graph cut based segmentation algorithm is developed for refining coarse manual segmentation, which allows precise identification of tumor regions. Second, by considering serial contrast-enhanced images as a single spatio-temporal image, a spatio-temporal model of segmented tumor is constructed to extract Spatio-Temporal Enhancement Patterns (STEPs). STEPs are designed to capture not only dynamic enhancement and architectural features, but also spatial variations of pixel-wise temporal enhancement of the tumor. While temporal enhancement features are extracted through Fourier transform, the resulting STEP framework captures spatial patterns of temporal enhancement features via moment invariants and rotation invariant Gabor textures. High accuracy of the proposed framework is a direct consequence of this two pronged approach, which is validated through experiments yielding, for instance, an area of 0.97 under the ROC curve.

We present a fully automatic segmentation algorithm for the whole heart (four chambers, left ventricular myocardium and trunks of the aorta, the pulmonary artery and the pulmonary veins) in cardiac MR image volumes with nearly isotropic voxel resolution, based on shape-constrained deformable models. After automatic model initialization and reorientation to the cardiac axes, we apply a multi-stage adaptation scheme with progressively increasing degrees of freedom. Particular attention is paid to the calibration of the MR image intensities. Detailed evaluation results for the various anatomical heart regions are presented on a database of 42 patients. On calibrated images, we obtain an average segmentation error of 0.76mm.

Magnetic Resonance (MR) temperature mapping can be used to monitor temperature changes during minimally invasive thermal therapies. However, MR-thermometry contains artefacts caused by phase errors induced by organ motion in inhomogeneous magnetic fields.

This paper proposes a novel correction strategy based on a Principal Component Analysis (PCA) to estimate magnetic field perturbation assuming a linear magnetic field variation with organ displacement. The correction method described in this paper consists of two steps : a magnetic field perturbation model is computed in a learning step; subsequently, during the intervention, this model is used to reconstruct the magnetic field perturbation corresponding to the actual organ position which in turns allow computation of motion corrected thermal maps.