Catálogo de publicaciones - libros

We have developed a novel model-to-image registration technique which aligns a 3-dimensional model of vasculature with two semi-orthogonal fluoroscopic projections. Our vascular registration method is used to intra-operatively initialize the alignment of a catheter and a pre-operative vascular model in the context of image-guided TIPS (Transjugular, Intrahepatic, Portosystemic Shunt formation) surgery. Registration optimization is driven by the intensity information from the projection pairs at sample points along the centerlines of the model. Our algorithm shows speed, accuracy and consistency given clinical data.

Image registration is a fundamental problem in medical imaging. It is especially challenging in lung images compared, for example, with the brain. The challenges include large anatomical variations of human lung and a lack of fixed landmarks inside the lung. This paper presents a new method for lung HRCT image registration. It employs a landmark-based global transformation and a novel ray-tracing-based lung surface registration. The proposed surface registration method has two desirable properties: 1) it is fully reversible, and 2) it ensures that the registered lung will be inside the target lung. We evaluated the registration performance by applying it to lung regions mapping. Tested on 46 scans, the registered regions were 89% accurate compared with the ground-truth.

We introduce an elastic registration approach which is based on a physical deformation model and uses Gaussian elastic body splines (GEBS). We formulate an extended energy functional related to the Navier equation under Gaussian forces which also includes landmark localization uncertainties. These uncertainties are characterized by weight matrices representing anisotropic errors. Since the approach is based on a physical deformation model, cross-effects in elastic deformations can be taken into account. Moreover, we have a free parameter to control the locality of the transformation for improved registration of local geometric image differences. We demonstrate the applicability of our scheme based on 3D CT images from the Truth Cube experiment, 2D MR images of the brain, as well as 2D gel electrophoresis images. It turns out that the new scheme achieves more accurate results compared to previous approaches.

In this paper we propose a method for the nonrigid registration of contrast-enhanced dynamic sequences of magnetic resonance(MR) images. The algorithm has been developed with accuracy in mind, but also has a clinically viable execution time (i.e. a few minutes) as a goal. The algorithm is driven by multiresolution optical flow with the brightness consistency assumption relaxed, subject to a regularized best-fit within a family of transforms. The particular family of transforms we have employed uses a grid of control points and trilinear interpolation. We present validation results from a study simulating non-rigid deformation by a biomechanical model of the breast, with simulated uptake of a contrast agent. We further present results from applying the algorithm as part of a routine breast cancer screening protocol.

With the growing acceptance of nonrigid registration as a useful tool to perform clinical research, and in particular group studies, the storage space needed to hold the resulting transforms is deemed to become a concern for vector field based approaches, on top of the traditional computation time issue. In a recent study we lead, which involved the registration of more than 22,000 pairs of T MR volumes, this constrain appeared critical indeed. In this paper, we propose to decompose the vector field on a wavelet basis, and let the registration algorithm minimize the number of non-zero coefficients by introducing an penalty. This enables a sparse representation of the vector field which, unlike parametric representations, does not confine the estimated transform into a small parametric space with a fixed uniform smoothness : nonzero wavelet coefficients are optimally distributed depending on the data. Furthermore, we show that the iconic feature registration framework allows to embed the non-differentiable penalty into a energy that can be efficiently minimized by standard optimization techniques.

In this paper we propose a diffeomorphic non-rigid registration algorithm based on free-form deformations (FFDs) which are modelled by B-splines. In contrast to existing non-rigid registration methods based on FFDs the proposed diffeomorphic non-rigid registration algorithm based on free-form deformations (FFDs) which are modelled by B-splines. To construct a diffeomorphic transformation we compose a sequence of free-form deformations while ensuring that individual FFDs are one-to-one transformations. We have evaluated the algorithm on 20 normal brain MR images which have been manually segmented into 67 anatomical structures. Using the agreement between manual segmentation and segmentation propagation as a measure of registration quality we have compared the algorithm to an existing FFD registration algorithm and a modified FFD registration algorithm which penalises non-diffeomorphic transformations. The results show that the proposed algorithm generates diffeomorphic transformations while providing similar levels of performance as the existing FFD registration algorithm in terms of registration accuracy.

Nonlinear image registration is a prerequisite for a variety of medical image analysis tasks. A frequently used registration method is based on manually or automatically derived point landmarks leading to a sparse displacement field which is densified in a thin-plate spline (TPS) framework. A large problem of TPS interpolation/approximation is the requirement for evenly distributed landmark correspondences over the data set which can rarely be guaranteed by landmark matching algorithms. We propose to overcome this problem by combining the sparse correspondences with intensity-based registration in a generic nonlinear registration scheme based on the calculus of variations. Missing landmark information is compensated by a stronger intensity term, thus combining the strengths of both approaches. An explicit formulation of the generic framework is derived that constrains an intra-modality intensity data term with a regularization term from the corresponding landmarks and an anisotropic image-driven displacement regularization term. An evaluation of this algorithm is performed comparing it to an intensity- and a landmark-based method. Results on four synthetically deformed and four clinical thorax CT data sets at different breathing states are shown.

We present a new approach for the registration of breast MR images, which are acquired at different time points for observation of lesion evolution. In this registration problem, it is of utmost importance to correct only for differences in patient positioning and to preserve other diagnostically important differences between both images, resulting from anatomical and pathological changes between both acquisitions. Classical free form deformation algorithms are therefore less suited, since they allow too large local volume changes and their deformation is not biomechanically based. Instead of adding constraints or penalties to these methods in order to restrict unwanted deformations, we developed a truly biomechanically based registration method where the position of skin and muscle surface are used as the only boundary conditions. Results of our registration method show an important improvement in correspondence between the reference and the deformed floating image, without introducing physically implausible deformations and within a short computational time.

A particular problem in image registration arises for multi-modal images taken from different imaging devices and/or modalities. Starting in 1995, mutual information has shown to be a very successful distance measure for multi-modal image registration. However, mutual information has also a number of well-known drawbacks. Its main disadvantage is that it is known to be highly non-convex and has typically many local maxima.

This observation motivate us to seek a different image similarity measure which is better suited for optimization but as well capable to handle multi-modal images. In this work we investigate an alternative distance measure which is based on normalized gradients and compare its performance to Mutual Information. We call the new distance measure Normalized Gradient Fields (NGF).

A new approach to align an image of a medical object with a given prototype is proposed. Visual appearance of the images, after equalizing their signals, is modelled with a new Markov-Gibbs random field with pairwise interaction model. Similarity to the prototype is measured by a Gibbs energy of signal co-occurrences in a characteristic subset of pixel pairs derived automatically from the prototype. An object is aligned by an affine transformation maximizing the similarity by using an automatic initialization followed by gradient search. Experiments confirm that our approach aligns complex objects better than popular conventional algorithms.